labblouin.expresso module
An (incomplete) parsing library for output from the T-Coffee Expresso executable.
expresso Python Library / Summer 2013 / Alex Safatli
E-mail: safatli@cs.dal.ca
Dependencies: -
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class labblouin.expresso.expressoParser(fin)[source]
Parses Expresso output.
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getNonEmptySequenceNames()[source]
Gets non-empty PDB names.
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getPDBcodes()[source]
Return PDB code and chain as a tuple for each line.
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writeNonEmpty(fout)[source]
Writes non-empty PDB IDs to file.